CDS

Accession Number TCMCG016C26289
gbkey CDS
Protein Id OMO54387.1
Location join(64781..65009,65128..65179,65566..65623,66293..66361,66478..66603,67130..67180,68192..68269,68507..68609,68917..68951,69025..69453)
Organism Corchorus capsularis
locus_tag CCACVL1_27819

Protein

Length 409aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01014982.1
Definition DNA glycosylase/AP lyase [Corchorus capsularis]
Locus_tag CCACVL1_27819

EGGNOG-MAPPER Annotation

COG_category L
Description Formamidopyrimidine-DNA glycosylase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K10563        [VIEW IN KEGG]
EC 3.2.2.23        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
4.2.99.18        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko03410        [VIEW IN KEGG]
map03410        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0006979        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016798        [VIEW IN EMBL-EBI]
GO:0016799        [VIEW IN EMBL-EBI]
GO:0019104        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0140097        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCCGGAGCTTCCAGAGGTTGAGGCAGCGAGGAGAGCGATAGAAGAAAACTGTTTGGGGAAGGAGATCAAGAAAGTGATAATAGCCGATGATTCTAAGGTCATTGAAGGAGTCTCCGCCTCGGACTTCGAGGCCTCTCTATTAGGCAAGACCATCGTCGCCGCTCACCGGAAGGGCAAGAACCTCTGGCTCCAACTCGATTCCCCTCCTTTCCCTACTTTCCAATTCGGGATGGCTGGTGCCATTTATATAAAAGGCGTTGCTGTTACTGAATATAAGAGGTCTGTTGTAAAGGACGATGATGAATGGCCTTCCAAATATTCCAAGTTCTTTGTTGAACTAGATGATGGATTGGAGCTGTCTTTCACAGATAAGAGGCGGTTTGCTAGAGTTCGCTTGCTCAAAGATCCTACCTCTGTGCCTCCTATATCGGAGCTTGGTCCCGATGCACTGTTTGAGCCTATGACAGTTGATGAGTTTACAGAATCTATAAGCAAGAAGAAGACTGCAATTAAAGCTTTATTGCTTGATCAGAGTTTCATCTCAGGAATTGGAAACTGGATTGCAGATGAAGTGCTATATCAAGCAAGGATTCATCCACTGCAGATTTCTTCCAGCTTGTCCAAAGAAAGTTGTGCAACTTTACACAAGTGCATCAAGGAGGTAATTGAAAAGGCAGTTGAAGTTGGGGCAGACAGTAGTCAGTTCCCTAGTAGTTGGATATTTCATTCTCGCGAAAAGAAGCCGGGCAAGGCATTCGTTGATGGGAAGAAAATTGATTTTATCAATGCTGGTGGCAGGACATCAGCGTATGTACCAGAGTTGCAGAAGTTGAGCGGAACACAAGCTGCAAAAGCAGGAGGAAAACCTAGAAAGCAGGCTTCAAAGAGAAAAGGAGGTGAGGACAAGGATAATGATGAAGATGACAAGAGCGATGAACCTACAAGTGAGGAAGAGGAAACTACTAAAGGTGCCAAATCGAAAAAGGGAGGAAATACTAGAGGCCGTAGTAAAAAGCCTCCATTGAAAAGAAAATCTGAAGAGAGTGATGATGAGAATGATGGTAGTGAAGATGGTAGCAATGAGGATGATGAGGATGAAGATGAAGATGCAAAAAAGAAAGCTAGAAATGGTAGAAACAATAAAAGCAAACAAGCAAAGACTTCCAATACAACCAAGCGAGCAGTTAACAATCAAAATAGCAAGAAGCCAAAGAAGAAAGCAAAGTAG
Protein:  
MPELPEVEAARRAIEENCLGKEIKKVIIADDSKVIEGVSASDFEASLLGKTIVAAHRKGKNLWLQLDSPPFPTFQFGMAGAIYIKGVAVTEYKRSVVKDDDEWPSKYSKFFVELDDGLELSFTDKRRFARVRLLKDPTSVPPISELGPDALFEPMTVDEFTESISKKKTAIKALLLDQSFISGIGNWIADEVLYQARIHPLQISSSLSKESCATLHKCIKEVIEKAVEVGADSSQFPSSWIFHSREKKPGKAFVDGKKIDFINAGGRTSAYVPELQKLSGTQAAKAGGKPRKQASKRKGGEDKDNDEDDKSDEPTSEEEETTKGAKSKKGGNTRGRSKKPPLKRKSEESDDENDGSEDGSNEDDEDEDEDAKKKARNGRNNKSKQAKTSNTTKRAVNNQNSKKPKKKAK